velocyto.serialization module¶

velocyto.serialization.dump_hdf5()[source]¶

Dump all attribute of a python object to hdf5

Parameters:	obj (object) – a python object filename (str) – the name of the file to be saved data_compression (int) – the level of compression used by hdf5 chunks (Tuple, default=(2048, 2048)) – The size of the chunks to be used for compression/random access noarray_compression (int, default=9) – the compression level of `zlib`, used when the attribute is not an array pickle_protocol (int, default=2) – the protocol used by `pickle.dumps` when the attribute is not an array
Returns:
Return type:	Nothing but it creates a file `filename`

velocyto.serialization.load_hdf5(filename: str, obj_class: Type[object]) → object[source]¶

Load all attributes from a hdf5 encoded python object

Parameters:	filename – the name of the file to be loaded obj_class – the type of object to be generated
Returns:
Return type:	An object that has been filled with the attributes stored in the hdf5 file

Note