Source code for velocyto.gene_info

from typing import *
from collections import defaultdict
import logging
import velocyto as vcy


class GeneInfo:
    """A simple objects that stores basic info on a gene.
    Parsed from the .gtf file and used to build the row_attrs of the loom file"""
    __slots__ = ["genename", "geneid", "chrom", "strand", "start", "end"]

    def __init__(self, genename: str, geneid: str, chromstrand: str, start: int, end: int) -> None:
        self.genename = genename
        self.geneid = geneid
        self.chrom = chromstrand[:-1]
        self.strand = chromstrand[-1]
        self.start = start
        self.end = end